PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010929690.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 234aa    MW: 25172.8 Da    PI: 7.0938
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010929690.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.36.1e-2165114255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa a+++a+++++g
  XP_010929690.1  65 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEQAAIAYDEAALRFKG 114
                     7********.**********94....45***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.3E-3364123IPR001471AP2/ERF domain
PfamPF008473.8E-1465114IPR001471AP2/ERF domain
PROSITE profilePS5103224.82965122IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-2265123IPR016177DNA-binding domain
CDDcd000181.15E-3265123No hitNo description
SMARTSM003802.1E-3765128IPR001471AP2/ERF domain
PRINTSPR003678.1E-126677IPR001471AP2/ERF domain
PRINTSPR003678.1E-1288104IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MVSALAHVIS SSSPGVGVGV GVGGGETREI QPELSPAMAG TGSGSMEIRE LSQPSQEQGN  60
VRRRHYRGVR QRPWGKWAAE IRDPKKAARV WLGTFDTAEQ AAIAYDEAAL RFKGTKAKLN  120
FPERVQGRTD LGFLLSRGIP ERQPEPITPS AAATYPDLLQ YAQLLQSRDE DFHNVASGLY  180
IGGSFASGSS QMSPASMSGS SQEFLDFSSQ FGTSSSSTSW PHGDQKDKDS SQHP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-2664126467ATERF1
3gcc_A1e-2664126467ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010929690.11e-171ethylene-responsive transcription factor ERF113
TrEMBLA0A2H3XZ841e-121A0A2H3XZ84_PHODC; ethylene-responsive transcription factor ERF113-like
STRINGXP_008791015.11e-122(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44473571
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.12e-26ERF family protein