PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010929836.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 234aa    MW: 26642.8 Da    PI: 9.8949
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010929836.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.89.7e-12111152351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_010929836.1 111 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 152
                     79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.83486165IPR001471AP2/ERF domain
PfamPF008475.1E-6110153IPR001471AP2/ERF domain
SMARTSM003801.0E-4110167IPR001471AP2/ERF domain
SuperFamilySSF541714.05E-8110155IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-6113157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MVSIRRRRYL GLCTGKSSVP VELPKPADNG HTLENSNQNV KPFSVYPMPS DNLSLQKPLK  60
INVSEALPGS SNASGSSTSK EEANHYYPGK QIKRRKRHRR KHFEDQEQCI MRGVYFKNMK  120
WQAAIKVDKK QIHLGTVGSQ EEAARLYDRA AFMCGREPNF ELSEEEKQEL RQYKWDDFLA  180
VTRNAINNKK HQKRLGADRR KKPENQLQSN DGEHEQGTHA SSASDDGDAD TSVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188202KKHQKRLGADRRKKP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010929836.11e-177ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_010929837.11e-177ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_010929838.11e-177ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A2H3YT591e-134A0A2H3YT59_PHODC; ethylene-responsive transcription factor-like protein At4g13040 isoform X3
TrEMBLA0A2H3YU111e-134A0A2H3YU11_PHODC; ethylene-responsive transcription factor-like protein At4g13040 isoform X1
STRINGXP_008803499.11e-135(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-45ERF family protein