PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010930107.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 132aa    MW: 14502.2 Da    PI: 8.4689
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010930107.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16.2e-201868255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr+++ +g+++AeIrd +    +  r++lg+f+taeeAa+a+++a+ +++g
  XP_010930107.1 18 KHRGVRRRP-SGKYAAEIRDSTR---HgVRVWLGTFDTAEEAARAYDRAAYAMRG 68
                    79*******.7*********422...25*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.16E-201877No hitNo description
SuperFamilySSF541717.19E-231877IPR016177DNA-binding domain
SMARTSM003806.0E-361882IPR001471AP2/ERF domain
PROSITE profilePS5103222.6031876IPR001471AP2/ERF domain
PfamPF008471.5E-141868IPR001471AP2/ERF domain
PRINTSPR003672.1E-91930IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.0E-301977IPR001471AP2/ERF domain
PRINTSPR003672.1E-94258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MEEDSPKGKG KEKEGEVKHR GVRRRPSGKY AAEIRDSTRH GVRVWLGTFD TAEEAARAYD  60
RAAYAMRGPL AVLNFPEEIH SLSTSGSSSS PRGRGRGSSE TEQGKLVIEL ECLDDKVLEE  120
LLESGEKGGK KK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-311811714114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010930107.26e-90ethylene-responsive transcription factor ERF096
SwissprotQ9LTC56e-35ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2G9I9T06e-46A0A2G9I9T0_9LAMI; Uncharacterized protein
TrEMBLA0A2H3Z1386e-46A0A2H3Z138_PHODC; ethylene-responsive transcription factor ERF096-like
STRINGXP_008806913.11e-46(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.18e-22ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]