PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010930475.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 132aa    MW: 14325.2 Da    PI: 11.077
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010930475.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.12.9e-152271255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+Wv+eIr p   g rkr +lg++  ++ Aa a++ a+  l+g
  XP_010930475.1 22 RYRGVRRRR-WGKWVSEIRIP---GSRKRLWLGSYSAPQAAAVAHDTAMFLLRG 71
                    59****777.**********8...435**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.8E-92271IPR001471AP2/ERF domain
PROSITE profilePS5103221.2462281IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-252282IPR001471AP2/ERF domain
SMARTSM003806.9E-272287IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-172282IPR016177DNA-binding domain
PRINTSPR003674.9E-82334IPR001471AP2/ERF domain
CDDcd000184.67E-173083No hitNo description
PRINTSPR003674.9E-84561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MRRSEEQASR GSTGRTAGKE IRYRGVRRRR WGKWVSEIRI PGSRKRLWLG SYSAPQAAAV  60
AHDTAMFLLR GPSSSSGLNF PDHVTLSDCV GMSPKSIQRA ASDAGMAIDA ELIAAGPFME  120
ATWERGGLSC GN
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010930475.14e-92ethylene-responsive transcription factor ERF020
SwissprotQ9C9I82e-35ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A2H3XNZ06e-59A0A2H3XNZ0_PHODC; ethylene-responsive transcription factor ERF019
STRINGXP_008786563.11e-59(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64332951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.12e-31ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]