PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010930840.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family BES1
Protein Properties Length: 159aa    MW: 18810.1 Da    PI: 9.9436
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010930840.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822146.22.8e-45341413111
          DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas.aspesslqs 96 
                     s r+p+++ErEnn++RERrRR++aa+i+aGLR++Gny+lp +aD+n+VlkALc+eAGw v++DGt yr + ++++++++  + +   s  ++l+ 
  XP_010930840.1  34 SWRRPSERERENNRQRERRRRQVAARIFAGLRKHGNYELPRHADQNDVLKALCNEAGWHVDEDGTIYRSHLHHHNAMDHKSCTRGsGSNMTNLE- 127
                     779*******************************************************************999988887766554244445544. PP

          DUF822  97 slkssalaspvesys 111
                      l s + +    +y+
  XP_010930840.1 128 -LMSLQDHHLQLNYH 141
                     .44444433334444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.4E-3835114IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MEEERVVKRR GCIKRTRGPW LVRRQGRGGS VVTSWRRPSE RERENNRQRE RRRRQVAARI  60
FAGLRKHGNY ELPRHADQND VLKALCNEAG WHVDEDGTIY RSHLHHHNAM DHKSCTRGSG  120
SNMTNLELMS LQDHHLQLNY HIETKEEMKE DELSLDLTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A7e-1636101372437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B7e-1636101372437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C7e-1636101372437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D7e-1636101372437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
149RVVKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009795965.13e-45PREDICTED: uncharacterized protein LOC104242587
TrEMBLA0A1U7YAZ78e-44A0A1U7YAZ7_NICSY; uncharacterized protein LOC104242587
TrEMBLA0A2G9GG184e-44A0A2G9GG18_9LAMI; Uncharacterized protein
STRINGXP_008786570.11e-50(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132013032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.65e-19BES1 family protein