PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010930890.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family C2H2
Protein Properties Length: 393aa    MW: 43324.5 Da    PI: 9.2933
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010930890.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.5e-05170192223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +CpdCg+ F  +++L+ H+ + H
  XP_010930890.1 170 PCPDCGEIFMKPESLELHQAVrH 192
                     7******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280169192IPR007087Zinc finger, C2H2
PROSITE profilePS501578.538169197IPR007087Zinc finger, C2H2
SuperFamilySSF563996.23E-20194392No hitNo description
Gene3DG3DSA:3.90.228.104.1E-10196391IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MAEEWRRSKP LKKSHKSKKQ ADMKVEKPPT LRAFRSFFSC KDYQVVQGNK RKCKRIVCSG  60
SLCSLKDSSS VIRPETTSPE VYKKMASSRS FKTPPNETNR AVSTSCSSFN SSASITAPSS  120
SSSSSLSSSS SSLGGSFRGK HLRRFSGCYE CHVALDPTNG VSRAPSSICP CPDCGEIFMK  180
PESLELHQAV RHAVSELGPD DTSRNIVDII FQSSWLKKEP PMCKIDRILK VHSTQKTIAE  240
FENYRDSIKS RANKVAKKHP RCIADGNELL RFHCTTFACS LGLNGSTNLC QSVPQCHVCS  300
IIRNGFKIDS LGKIQTMATS GRAHDMAQIA SDDAKRAMLV CRVIAGRVKK SQDALEECDS  360
VANQAGIYSN LDELFVFDPK AILPCFVVVY SDY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010930890.20.0uncharacterized protein LOC105051938
TrEMBLA0A2H3XBV60.0A0A2H3XBV6_PHODC; uncharacterized protein LOC103701262
STRINGXP_008781482.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26333880
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-97C2H2-like zinc finger protein