PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010931249.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 349aa MW: 36187.4 Da PI: 8.9883

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010931249.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.7	3.1e-39	73	133	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e alkcprCdstntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++ XP_010931249.1 73 PEPALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 133 67899*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-35	57	126	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.1E-32	76	131	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.739	77	131	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	79	115	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence Send to blast
MVFSSVPVYL DPPNWNQQQA HQPPSASGGG SGEVHQLPPV LASPGPHEVG MAAGLVRPGS 60 MAERARLAKI PQPEPALKCP RCDSTNTKFC YFNNYSLSQP RHFCKTCRRY WTRGGALRNV 120 PVGGGCRRNK RTKSSGSSSK SSNTAANADR QVAGITSSSS PSTATSGGGA ILPHIPPPTQ 180 FPFMSSLHHT LADYSGASNL GLSFTGIQPI EQVDYQVGST SSIGLDHWRL QQIQQFPFLG 240 GLEPPPPPPA QPVPGIYPFD GEGGGQGFAG QVLPKVSGSA LITQLASVKM EDSSQGLNLP 300 RQYLGVPGND QYWGGGGGGG GASSGSGGGS AGWMGELSGF NSSSSGNIL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence Send to blast

MVFSSVPVYL DPPNWNQQQA HQPPSASGGG SGEVHQLPPV LASPGPHEVG MAAGLVRPGS  60
MAERARLAKI PQPEPALKCP RCDSTNTKFC YFNNYSLSQP RHFCKTCRRY WTRGGALRNV  120
PVGGGCRRNK RTKSSGSSSK SSNTAANADR QVAGITSSSS PSTATSGGGA ILPHIPPPTQ  180
FPFMSSLHHT LADYSGASNL GLSFTGIQPI EQVDYQVGST SSIGLDHWRL QQIQQFPFLG  240
GLEPPPPPPA QPVPGIYPFD GEGGGQGFAG QVLPKVSGSA LITQLASVKM EDSSQGLNLP  300
RQYLGVPGND QYWGGGGGGG GASSGSGGGS AGWMGELSGF NSSSSGNIL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010931249.1	0.0	dof zinc finger protein DOF5.1
TrEMBL	A0A2H3X122	1e-169	A0A2H3X122_PHODC; dof zinc finger protein DOF5.1 isoform X1
STRING	XP_008776709.1	1e-170	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4893	29	61

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	3e-48	OBF-binding protein 3