PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010931380.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 312aa    MW: 35477.3 Da    PI: 4.4749
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010931380.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.63.3e-25125185259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg +WrKYGqK++ +s++prsY+rCt++   +C+++++v++s++dp++ +itY geH+++
  XP_010931380.1 125 EDGRTWRKYGQKDIFNSKYPRSYFRCTHKydqDCQATRQVQQSEDDPSIYVITYMGEHTCR 185
                     89**************************99999*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-26112187IPR003657WRKY domain
PROSITE profilePS5081120.403119187IPR003657WRKY domain
SuperFamilySSF1182903.92E-25121187IPR003657WRKY domain
SMARTSM007749.7E-36124186IPR003657WRKY domain
PfamPF031063.0E-24125185IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MEYLEQENSS IDRKKLTGEL MKGQESATKL KILLQESFSS EDHAKNSMVE LFIEEILGSF  60
SRAFTILNSG KAPEAPVDQA TTPCSEEQES QNSSKKRKIQ SSPRTGYRRR ANLYSSTRIL  120
SETMEDGRTW RKYGQKDIFN SKYPRSYFRC THKYDQDCQA TRQVQQSEDD PSIYVITYMG  180
EHTCRDPTIS PHLLPPSPQR PSSIISFGSE TTADNQNEIP LNSSCFSVLK QETDEEAPSD  240
PTPRSSSLEF LMLPDIETFE WSAPMAQYMG IALDQCDATS DMHSSNSCLD MEINTISFEF  300
DDVFSVDQDK LF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-26119185369OsWRKY45
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010931380.10.0WRKY DNA-binding transcription factor 70
TrEMBLA0A2H3Y2070.0A0A2H3Y207_PHODC; probable WRKY transcription factor 70
STRINGXP_008792248.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.15e-31WRKY DNA-binding protein 54