PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010931510.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 243aa    MW: 27186.5 Da    PI: 6.076
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010931510.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.91.8e-2258119259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 
                     dDg++WrKYG K++ +s+fpr YYrCt++   gC+++k+v++++  dp  + +tY+++H+++
  XP_010931510.1  58 DDGHQWRKYGEKMISSSKFPRCYYRCTYKaeqGCQATKQVQQKDfGDPPSFLVTYTNKHTCS 119
                     8***************************99999*******976538**************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.5E-2446119IPR003657WRKY domain
SuperFamilySSF1182902.88E-2349119IPR003657WRKY domain
SMARTSM007743.1E-3457120IPR003657WRKY domain
PfamPF031066.5E-2458118IPR003657WRKY domain
PROSITE profilePS5081118.38358121IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MALSILKRSK TEVGHQDLVA TRSGIGSGDA AALGGDQRGQ GKRRDRHTWT IVTSIPYDDG  60
HQWRKYGEKM ISSSKFPRCY YRCTYKAEQG CQATKQVQQK DFGDPPSFLV TYTNKHTCSS  120
TFMAPHFVVD PCQSEPFSLC FDSSAGGIIN EQPAFLTSLP TIIQDCDGRM PNWQHDTSSS  180
SNQHMSLNVA SQAYMETAGT ILSSFDDICS NACPMWISHR SDVDYMMMEP MELIEFDGKE  240
LIF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-1658118968OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010931510.10.0probable WRKY transcription factor 14
TrEMBLA0A453HPB91e-35A0A453HPB9_AEGTS; Uncharacterized protein
STRINGEMT289362e-35(Aegilops tauschii)
STRINGTraes_4AL_9E0D1CFA6.12e-35(Triticum aestivum)
STRINGTraes_4DS_FE38A59D0.12e-35(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP203235100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.24e-20WRKY family protein