PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010931618.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 280aa MW: 29657.4 Da PI: 9.5461

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010931618.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	100.5	1e-31	33	91	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + lkcprC s +tkfCyynnyslsqPry+C +C+ryWt GG+lr vPvGg +rk +++ XP_010931618.1 33 RPRLKCPRCGSCDTKFCYYNNYSLSQPRYYCNNCKRYWTVGGTLRSVPVGGRSRKGRSR 91 5679***************************************************9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	26.496	36	90	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.6E-28	36	89	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	38	74	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	5.0E-13	43	81	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence Send to blast
MAASEQAQHE RKPKPRTRPP VQQQLQQCPQ RPRPRLKCPR CGSCDTKFCY YNNYSLSQPR 60 YYCNNCKRYW TVGGTLRSVP VGGRSRKGRS RGTNAAAKVQ MLANGSAAAV GTAGLPDLAP 120 AADPLPSSIL FGGGTGGILP WGLQALPDFN PDGIIGDCPA SSVISLPALD SRFGGSNYQQ 180 RQQLLGFGLG GTGRGRPAQQ LGLDPYPAMG YIGNGWPRHQ PTYSPVFSTA VAVTANAPPG 240 GGGSNTAEGL FVEEQCGGED WKLYLSARGH DPPPPSPSSM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010931618.1	0.0	dof zinc finger protein DOF1.7-like
TrEMBL	A0A2H3XWJ7	1e-124	A0A2H3XWJ7_PHODC; dof zinc finger protein DOF1.7-like
STRING	XP_008789845.1	1e-125	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38000.1	2e-17	DNA binding with one finger 4.7