PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010931747.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

WRKY

Protein Properties

Length: 283aa MW: 31938.7 Da PI: 8.4702

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010931747.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2e-30	86	144	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC++kk+vers++d ++++itY+++Hnh+ XP_010931747.1 86 SDFWSWRKYGQKPIKGSPYPRGYYRCSSSkGCSAKKQVERSKTDSSLLIITYTSDHNHP 144 699**********************998**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	3.3E-31	76	146	IPR003657	WRKY domain
SuperFamily	SSF118290	2.22E-25	83	146	IPR003657	WRKY domain
SMART	SM00774	4.8E-36	85	145	IPR003657	WRKY domain
PROSITE profile	PS50811	30.951	86	146	IPR003657	WRKY domain
Pfam	PF03106	2.4E-25	87	144	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence Send to blast
MNHVTAKNPV PQKQKEYVVG ERERRAHKLQ GTMDDGFPPI TQVLKFHKVS KMDNSVSKRR 60 KVFQKTVVTS RIEAEVGKQK GESPPSDFWS WRKYGQKPIK GSPYPRGYYR CSSSKGCSAK 120 KQVERSKTDS SLLIITYTSD HNHPGPHLPT ICPQEASPRN QSINQDLPAP KSPSQPNTTS 180 EGSLNKEQSP LPCPPKCSQE ISQQNQPLEE VHDHQQNVLF DEENPLPSPN SMTFSSTTPK 240 TNEENDFFDE LGELPIPSSL TSLVRESFFD ERILFLPSQT TFS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5w3x_B	9e-23	86	146	17	79	Disease resistance protein RRS1
5w3x_D	9e-23	86	146	17	79	Disease resistance protein RRS1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010931747.1	0.0	probable WRKY transcription factor 65
TrEMBL	A0A2H3YEJ6	1e-141	A0A2H3YEJ6_PHODC; probable WRKY transcription factor 14
STRING	XP_008797453.1	1e-142	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14912	18	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	4e-37	WRKY DNA-binding protein 35