PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010932347.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 386aa    MW: 43192.9 Da    PI: 4.5885
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010932347.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-19117166255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a ++k++g
  XP_010932347.1 117 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARKIRG 166
                     69*******.**********954...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.75E-33117175No hitNo description
Gene3DG3DSA:3.30.730.101.2E-32117175IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-22117176IPR016177DNA-binding domain
PROSITE profilePS5103224.131117174IPR001471AP2/ERF domain
SMARTSM003808.3E-38117180IPR001471AP2/ERF domain
PfamPF008477.4E-12118166IPR001471AP2/ERF domain
PRINTSPR003671.2E-11118129IPR001471AP2/ERF domain
PRINTSPR003671.2E-11140156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070483Biological Processdetection of hypoxia
GO:0005634Cellular Componentnucleus
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MCGGAIISDF IPPGRSWRRV TADCPWPDLK KGVEAKKSRG KRQPPVGIDD DDFETDFQEF  60
NDESPESEVD DEAELIDVKP FAYPSKTPFS RDRSTTLKPA EYDGPVARSA KRKRKNQYRG  120
IRQRPWGKWA AEIRDPRKGV RVWLGTFNTA EEAARAYDAE ARKIRGKKAK VNFPDEMRPS  180
AQKRSQKAAA PRATESNQPE ILKFNQSLSY LDEPHQDLYS TFDFIEEKQP IKQAGNLSAF  240
PAINPALPTE GPGTNLYSDQ GSNSFGCSDL GWEHEAKTPE ITSVLALIPT IIEGEQSAFL  300
EDGAPQKKMK NNAGEAVPPS EENAAVKLSE DMSDFDSFLK FLQIPYPEES SDESIDHLLS  360
SDVTQDMNDV DLWSFDYLPA VEGSVY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-211161761374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00204DAPTransfer from AT1G53910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010932347.10.0ethylene-responsive transcription factor 1
TrEMBLA0A2H3XIM20.0A0A2H3XIM2_PHODC; ethylene-responsive transcription factor 1-like
STRINGXP_008784363.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103938134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.39e-61related to AP2 2