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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_010932507.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
BBR-BPC |
| Protein Properties |
Length: 271aa MW: 29883.6 Da PI: 10.4296 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010932507.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 318.5 | 2.1e-97 | 1 | 271 | 1 | 301 |
GAGA_bind 1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdaki.rernlalsekkaavaerd.........maflqrdkalaernkalverdnkllal 84
mdd+g rn++yye+ lk+nlglqlmss+aer+a+ +n + + +rd +f rd ++++ +r+ k++++
XP_010932507.1 1 MDDNGGLGmRNWAYYEQP--LKRNLGLQLMSSVAERNAAKpLLAN-------GGFFHRDcgmpeppapLEF-ARDGWMSH------HRETKMVHM 79
899988888********9..*****************98633333.......4444444455555566999.9******9......9******** PP
GAGA_bind 85 llvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvk 179
++ + + ++vlsg++ + l + l+++ + k ++ p+ + + + ke++ kk ++++k++k kk+kk + +++++
XP_010932507.1 80 MPLNPN--------YSVLSGAHGSQALPM-----LQPPEPP-----KDDKIPLMDDPGSRKEAPLKK----KAQAKAPKPKKPKKIA-ARNETSN 151
**6654........89999****999999.....5555555.....446788888888888877766....4566777777777733.3333333 PP
GAGA_bind 180 kesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaa 274
+ +r ++ +ks+d+v+ng++lD+s++P+PvCsCtG+++qCY+WG GGWqSaCCt++iS+yPLP+stkrrgaRiagrKmSqgafkk+LekLa+
XP_010932507.1 152 GSV--SRGRNVRKSLDVVINGIDLDISGIPTPVCSCTGTPQQCYRWGVGGWQSACCTMSISMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAG 244
333..789*************************************************************************************** PP
GAGA_bind 275 eGydlsnpvDLkdhWAkHGtnkfvtir 301
eGy+lsnp+DLk++WAkHGtnkfvtir
XP_010932507.1 245 EGYNLSNPIDLKNYWAKHGTNKFVTIR 271
**************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MDDNGGLGMR NWAYYEQPLK RNLGLQLMSS VAERNAAKPL LANGGFFHRD CGMPEPPAPL 60
EFARDGWMSH HRETKMVHMM PLNPNYSVLS GAHGSQALPM LQPPEPPKDD KIPLMDDPGS 120
RKEAPLKKKA QAKAPKPKKP KKIAARNETS NGSVSRGRNV RKSLDVVING IDLDISGIPT 180
PVCSCTGTPQ QCYRWGVGGW QSACCTMSIS MYPLPMSTKR RGARIAGRKM SQGAFKKVLE 240
KLAGEGYNLS NPIDLKNYWA KHGTNKFVTI R
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Positively regulates the homeotic gene BKN3. {ECO:0000269|PubMed:12795701}. |
