PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010932613.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 430aa    MW: 46890.9 Da    PI: 7.3448
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010932613.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.53.9e-10142177540
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                     k  rr+++NReAAr+sR+RKka++++Le    +L +
  XP_010932613.1 142 KGLRRLAQNREAARKSRLRKKAYVQQLEISRLKLIQ 177
                     5679************************75555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-6138201IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-7138186No hitNo description
PROSITE profilePS502178.818140184IPR004827Basic-leucine zipper domain
PfamPF001703.7E-7142170IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.88E-6142183No hitNo description
CDDcd147086.42E-21142194No hitNo description
PROSITE patternPS000360145160IPR004827Basic-leucine zipper domain
PfamPF141444.5E-29227302IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MYSSHPYRGD QPQAGFNLGD AVLGLTRSPI LSTKSSNNIT AVTSSPLQLQ FGGLVHAGMA  60
SLDMAASSVG AEVDMGKFSF PRGQIENWGD SGVVVTSSRS TDASTDADTD DRNKAPIGAG  120
QQGAIVSLDS SYASKGKTGD QKGLRRLAQN REAARKSRLR KKAYVQQLEI SRLKLIQLEQ  180
ELQRAQQQGI FIAGGLFGDH SYSTGGNGAM AFDMEYARWL DEHQRLINDL RSALNARVVD  240
NELQLHVDAL MTHYDEFFRL KSIGTKSDVF HMLSGMWTTP AERCFMWLGG FRSSELLKIL  300
ASHLEPLTDQ QLMGICNLQQ SSQQAEDALS QGMEALQQSL SDTLASASLG ASGGTDDVAC  360
YMGQMAIAMG KLGTLESFLR QADLLRQQTL RQMHRILTTS QAAHALLAIS DYFSRLRALS  420
SLWLARPRGS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010932613.10.0transcription factor TGA2 isoform X2
SwissprotQ5Z6N91e-170TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLM0U0L30.0M0U0L3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P15550_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-130bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]