PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010932672.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 671aa    MW: 73974.3 Da    PI: 6.6769
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010932672.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.36.2e-094324691954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +e+  LA+++gLt +q+++WF N R +
  XP_010932672.1 432 FEHflHPYPKDSEKLMLARQTGLTRSQISNWFINARVR 469
                     664459******************************88 PP
2BELL122.91.3e-39295366172
            BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     erq+lq+k +kLl +l+eVd+rYkqy++q+q+v+ssF+ vag+gsakpYt+lAlk+iSr+FrcL+dai  qi
  XP_010932672.1 295 ERQDLQNKMTKLLAMLDEVDRRYKQYYHQMQIVVSSFDGVAGCGSAKPYTALALKTISRQFRCLRDAINCQI 366
                     799*****************************************************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005745.0E-58216364IPR006563POX domain
PfamPF075264.1E-49222362IPR006563POX domain
PROSITE profilePS5007112.179410473IPR001356Homeobox domain
CDDcd000861.32E-12413474No hitNo description
SMARTSM003891.3E-9413477IPR001356Homeobox domain
SuperFamilySSF466892.57E-17414480IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.1E-28416479IPR009057Homeodomain-like
PfamPF059201.1E-17430469IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    Send to blast
MASFYSSSTN QMDVMPTFYT RDPGHGSYPE SSTTSHMMYP QYSSSVPYSG KLTGNNQSQQ  60
NCIDPPVPAS MISQDSSTGG ADFASHLGER PYNALRDGRN EVLFMQTIGR SLNEGSDLVH  120
GSVADDPHMS LHTPLGILNG HNLSLQQSNI STAQRQALSL SLSTQIPVPS FQFQPSNSDI  180
SILSSHQSNL GDGRAFRDDI YRNKLMHSNA SPYDISSITS TIPNSRYLKA AQQLLDEVVN  240
VQKALNQKTG KTQSLDNSAG ATDTKNNNAV SKADGMSLNP QGSNDQSPTE LLPSERQDLQ  300
NKMTKLLAML DEVDRRYKQY YHQMQIVVSS FDGVAGCGSA KPYTALALKT ISRQFRCLRD  360
AINCQIQATK KNLGEKDSSN SKGGGISRLK YIDQQLRQQR AMQQLGMVQH NAWRPQRGLP  420
ETSVSVLRAW LFEHFLHPYP KDSEKLMLAR QTGLTRSQIS NWFINARVRL WKPMIEEMYR  480
EEIGEAEMDS NSSLENIPKS KDETGSSEER ERSKSPATER CHTSQLNESS KSNISDMDVG  540
GTAAGFPNEA NADDTFMNLM LKDRRHDGGD CGLLHDAIAQ KSDGGRRLVA YPMAELGRYG  600
HGGVSLTLGL QHCDGGLPVS NSQQSFPGVR GQDVYTAAPP LEADAADYDC INLMDQRHRF  660
GPSPLLHDFV A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A1e-16419476158Homeobox protein Meis1
4xrs_B1e-16419476158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010932672.10.0BEL1-like homeodomain protein 7
RefseqXP_010932680.10.0BEL1-like homeodomain protein 7
RefseqXP_029123261.10.0BEL1-like homeodomain protein 7
TrEMBLA0A2H3Y6610.0A0A2H3Y661_PHODC; BEL1-like homeodomain protein 7 isoform X2
STRINGXP_008794014.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP90138131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-117BEL1-like homeodomain 7