PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010933407.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 422aa    MW: 44538.1 Da    PI: 6.3254
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010933407.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.64.8e-22310372163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v++L++eN+aL+ e+++++k +++l +++
  XP_010933407.1 310 ERELKRQKRKQSNRESARRSRLRKQAECEELARRVEALKEENTALRAEVDRMRKDYEQLLAQN 372
                     89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.5E-32198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165967.4E-48137274No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-19303371No hitNo description
PfamPF001701.1E-20310372IPR004827Basic-leucine zipper domain
SMARTSM003384.0E-22310374IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.438312375IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-11313369No hitNo description
CDDcd147028.89E-24315365No hitNo description
PROSITE patternPS000360317332IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MGTSESDAPP KAPKTSGAQE QPPATSSSPT TTMYPDWSGF QAYSPIPPHG FFHSPVASSP  60
QAHPYMWGAQ HLMPPFGTPP PPYVMYPHGG LYAHPSIPPG SHPFGPYAVP STNGNPEASG  120
AVTTGMEGDG KSSEGKERSP IKRSKGSLGS LNMITGKNND LGKTSGAANG VFSQSSESGS  180
EGSSDGSDVN SQNDSQAKMC GGRDSFDAEV SQNDTTARGS QNGVSRAPTQ AAASQTIPIM  240
PMPVAGVPGM VAGPTTNLNI GMDYWNASNP PTIPPVRGKA PAATVAGAMV PGGLVGSREN  300
VPSELWIQDE RELKRQKRKQ SNRESARRSR LRKQAECEEL ARRVEALKEE NTALRAEVDR  360
MRKDYEQLLA QNASLKEKLG EPTKGSEDAK LDENNQDSVD DTQKHSDSIV KAGQPDSAPS  420
GC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1326332RRSRLRK
2326333RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029123155.10.0bZIP transcription factor 68 isoform X6
SwissprotB6E1071e-143BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLA0A2H3YTE00.0A0A2H3YTE0_PHODC; bZIP transcription factor 68-like isoform X3
STRINGXP_008803611.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-124basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]