PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010933411.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 421aa    MW: 44451 Da    PI: 6.3254
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010933411.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.64.8e-22309371163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v++L++eN+aL+ e+++++k +++l +++
  XP_010933411.1 309 ERELKRQKRKQSNRESARRSRLRKQAECEELARRVEALKEENTALRAEVDRMRKDYEQLLAQN 371
                     89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.4E-32198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.6E-46137273No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-19302370No hitNo description
SMARTSM003384.0E-22309373IPR004827Basic-leucine zipper domain
PfamPF001701.1E-20309371IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.438311374IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-11312368No hitNo description
CDDcd147028.77E-24314364No hitNo description
PROSITE patternPS000360316331IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MGTSESDAPP KAPKTSGAQE QPPATSSSPT TTMYPDWSGF QAYSPIPPHG FFHSPVASSP  60
QAHPYMWGAQ HLMPPFGTPP PPYVMYPHGG LYAHPSIPPG SHPFGPYAVP STNGNPEASG  120
AVTTGMEGDG KSSEGKERSP IKRSKGSLGS LNMITGKNND LGKTSGAANG VFSQSESGSE  180
GSSDGSDVNS QNDSQAKMCG GRDSFDAEVS QNDTTARGSQ NGVSRAPTQA AASQTIPIMP  240
MPVAGVPGMV AGPTTNLNIG MDYWNASNPP TIPPVRGKAP AATVAGAMVP GGLVGSRENV  300
PSELWIQDER ELKRQKRKQS NRESARRSRL RKQAECEELA RRVEALKEEN TALRAEVDRM  360
RKDYEQLLAQ NASLKEKLGE PTKGSEDAKL DENNQDSVDD TQKHSDSIVK AGQPDSAPSG  420
C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325331RRSRLRK
2325332RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029123157.10.0bZIP transcription factor 68 isoform X8
SwissprotB6E1071e-142BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLA0A2H3YTE00.0A0A2H3YTE0_PHODC; bZIP transcription factor 68-like isoform X3
STRINGXP_008803611.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-127basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]