PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010934429.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 235aa    MW: 25214 Da    PI: 4.9666
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010934429.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-184293155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + ykGVr++   grWv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+ +l+g
  XP_010934429.1 42 PVYKGVRRRGPAGRWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAMALRG 93
                    68****************9998...347*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-144293IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-2043103IPR016177DNA-binding domain
PROSITE profilePS5103222.22143101IPR001471AP2/ERF domain
SMARTSM003801.1E-2643107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-3043103IPR001471AP2/ERF domain
CDDcd000188.76E-2744103No hitNo description
PRINTSPR003673.1E-54455IPR001471AP2/ERF domain
PRINTSPR003673.1E-56783IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MEYFGSDSSS PSTSAEYEYA TVSSAPPKRP AGRTKFRETR HPVYKGVRRR GPAGRWVCEV  60
REPNKKSRIW LGTFPTAEMA ARAHDVAAMA LRGRSACLNF ADSAWLLPVL PRFSSTKDIQ  120
RAAVEAAEAF RPSTEPDNVG TSGTAAAQME SSSEGAAMPL QPSEGTVGGD SDHGVDAMFF  180
DDMELGMHGY YYASMAEALL VEPPSASAVA VAGWGNGNWD EVENGADVSL WSHSV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-13411001271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010934429.11e-173dehydration-responsive element-binding protein 1C
TrEMBLA0A2H3YX001e-140A0A2H3YX00_PHODC; dehydration-responsive element-binding protein 1C-like
STRINGXP_008804750.11e-141(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.14e-46C-repeat/DRE binding factor 2