PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010935437.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 206aa    MW: 22444.9 Da    PI: 6.7771
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010935437.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.11.4e-31120178159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     l+Dg++WrKYG+K+vk+s++pr+YYrC+++gCpvkk+ver++edp++v++tYeg Hnh 
  XP_010935437.1 120 LNDGFKWRKYGKKSVKNSPNPRNYYRCSTEGCPVKKRVERDKEDPSYVITTYEGIHNHM 178
                     58********************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-33107180IPR003657WRKY domain
SuperFamilySSF1182904.58E-28112179IPR003657WRKY domain
PROSITE profilePS5081131.031115180IPR003657WRKY domain
SMARTSM007748.9E-36120179IPR003657WRKY domain
PfamPF031062.7E-25121177IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MAAVGAPLHA LANMAYFPSQ TGQGSDLTYD DLQSDQSAAF DLSDYILFEE GLAPASFGQP  60
VNAVSPMVDA DQTASQISGS NLTTISSSSS STRRSGVLER LRVAEGSRIA FRTKSEVEIL  120
NDGFKWRKYG KKSVKNSPNP RNYYRCSTEG CPVKKRVERD KEDPSYVITT YEGIHNHMSP  180
GVVYYTTKDT ASGRFYVAGC ELPPGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-28107181176WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010935437.11e-153probable WRKY transcription factor 50
TrEMBLA0A2H3ZDW21e-110A0A2H3ZDW2_PHODC; probable WRKY transcription factor 50
STRINGXP_008812294.11e-110(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44137206
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.12e-42WRKY DNA-binding protein 50