PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010935747.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 130aa    MW: 14647.1 Da    PI: 8.8612
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010935747.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-201567156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    ++y+GVr+++ +g+++AeIrd +    + +r++lg+f taeeAa+a+++a+ +++g+
  XP_010935747.1 15 TKYRGVRRRP-WGKYAAEIRDSTR---HgARIWLGTFNTAEEAARAYDRAAYAMRGA 67
                    69********.**********422...25*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.0E-151566IPR001471AP2/ERF domain
CDDcd000182.50E-181575No hitNo description
SuperFamilySSF541713.2E-241676IPR016177DNA-binding domain
PROSITE profilePS5103223.6041674IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-311675IPR001471AP2/ERF domain
SMARTSM003804.7E-341680IPR001471AP2/ERF domain
PRINTSPR003677.8E-121728IPR001471AP2/ERF domain
PRINTSPR003677.8E-124056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MEEDPSREGG KEGETKYRGV RRRPWGKYAA EIRDSTRHGA RIWLGTFNTA EEAARAYDRA  60
AYAMRGALAI LNFPDEFHSR SRSSSSSSAS TSWGGASREQ RNQVIEFEYL DDKVLEDMLG  120
HGEEKGGKKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-361611414114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010935747.19e-91ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC58e-41ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2H3XR401e-66A0A2H3XR40_PHODC; ethylene-responsive transcription factor ERF095-like
STRINGXP_008787547.12e-67(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.14e-28Ethylene-responsive element binding factor 14
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]