PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010936060.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 376aa    MW: 40429.7 Da    PI: 4.7609
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010936060.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_153.35.9e-17254310359
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                     + kr+rr+++NRe+ArrsR+RK+a + eLe  v +L  eN++L k l   ++++ + 
  XP_010936060.1 254 DAKRARRMISNRESARRSRRRKQAHLNELEAQVSQLRVENSSLLKSLTDVNQKYNEA 310
                     78******************************************9999999888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.8E-19252316IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.484254309IPR004827Basic-leucine zipper domain
PfamPF001703.6E-14255307IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.88E-12256307No hitNo description
Gene3DG3DSA:1.20.5.1703.9E-12256308No hitNo description
CDDcd147025.89E-7257308No hitNo description
PROSITE patternPS000360259274IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MERVFSVDEI ADSFWAASPP GHGLPPPVAT DGGPRGAMSR SPSEWYFEKF LEVAEEATVP  60
STTSPAPPNP NPNPNSNPNL NPSPPPASVV ASNFYGGGRK DEGRGDDDEV IQIKAPAIVP  120
ATVALHRGPP SDPPMDVDPE EYAVLLKKRL DMYCAAVAMS RSSGVNPQDS SASTDIKSQF  180
LDASELGSQA PATGNGSMVQ QKAGSGPSGG PVPTVMQNLG VQARPTTSGS SREQSDDEEL  240
EGEVETTENM DPADAKRARR MISNRESARR SRRRKQAHLN ELEAQVSQLR VENSSLLKSL  300
TDVNQKYNEA AVDNRILKAD VETLRAKPSG ICGRGLGCLS LDWLNMSLKY MDDAGEDGRG  360
HCKESNWYQS HVPEHP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1268275RRSRRRKQ
2270275SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010936060.10.0light-inducible protein CPRF2 isoform X3
TrEMBLA0A2H3XMQ91e-122A0A2H3XMQ9_PHODC; bZIP transcription factor RISBZ2-like isoform X1
STRINGXP_008786076.11e-122(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.34e-35bZIP family protein