PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010936180.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 174aa MW: 20202 Da PI: 10.3204

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010936180.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.7	6.1e-14	61	106	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r rr+++NRe+ArrsR RK+ ++eeL+ +v L +eN+aL ++l XP_010936180.1 61 RRRRRMISNRESARRSRMRKQRYLEELRAEVNRLRSENRALENRLA 106 799**************************************96654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.5E-13	51	108	No hit	No description
SMART	SM00338	9.3E-16	57	121	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.496	59	108	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.8E-11	60	107	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.53E-11	61	110	No hit	No description
PROSITE pattern	PS00036	0	64	79	IPR004827	Basic-leucine zipper domain
CDD	cd14702	8.88E-16	66	112	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence Send to blast
MLALEEALDL PFPLLEQVFN DELGFTPWET QPTPDHETFA RTGPQPGRDE PDRPPSLDEE 60 RRRRRMISNR ESARRSRMRK QRYLEELRAE VNRLRSENRA LENRLATMVH CCLLFRRDND 120 RLQSVSAALN RRISELRRVL LLRRQLHRLS SPASATVCGG FAPGTDQTVS SLIV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	80	RRSRMRKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010936180.1	1e-122	basic leucine zipper 4
TrEMBL	A0A2H3XXU1	2e-80	A0A2H3XXU1_PHODC; bZIP transcription factor 27
STRING	XP_008790285.1	2e-82	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP17765	5	10

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37730.1	1e-07	basic leucine-zipper 7