PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010936884.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 370aa    MW: 39712.6 Da    PI: 8.646
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010936884.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.34.5e-20280342163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v + ++eN +Lk+el++++ e++kl+se+
  XP_010936884.1 280 ERELKRQKRKQSNRESARRSRLRKQAECEELANRVVTQKEENNSLKEELKRMRGECDKLTSEN 342
                     89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165962.9E-26131242No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-17274339No hitNo description
SMARTSM003387.8E-19280344IPR004827Basic-leucine zipper domain
PfamPF001706.9E-18280342IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.151282345IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.02E-10283339No hitNo description
CDDcd147022.78E-21285336No hitNo description
PROSITE patternPS000360287302IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MLLEQVLCLL RGFSILMWHR VHKGAHICGV HRYLLLLLFA IIFIIYNLVL GGCCNDACLS  60
LQRTGFSSKK KGQIISPYRT PPFVSMYPHG GIYPHPSIPP GSYQYSPYPM PSTNGIAEAS  120
VAGASGTETD GKVNKTGKAS SGSANGVFSQ SGESGSEGSS EGSDANSQNG SRLKHGSEHG  180
SGDEEAQKGR TGQTTSNEVT QTLSTPIVLN PTVPFVTIPP GGLVGPTTTL NIGMDYWGGS  240
ASVSAVRGKV PSAPSTAPFV PSRLAGSRDK VPPDPSIQDE RELKRQKRKQ SNRESARRSR  300
LRKQAECEEL ANRVVTQKEE NNSLKEELKR MRGECDKLTS ENATLAEKLG KHLGDESRSD  360
EQVDSVNGDG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1296302RRSRLRK
2296303RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010936883.10.0bZIP transcription factor 16 isoform X2
RefseqXP_010936884.10.0bZIP transcription factor 16 isoform X6
SwissprotQ501B21e-73BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A3Q0I8E21e-170A0A3Q0I8E2_PHODC; bZIP transcription factor 16-like isoform X3
STRINGXP_008798444.11e-158(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.14e-61basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]