PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010936940.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family AP2
Protein Properties Length: 615aa    MW: 66628.7 Da    PI: 7.065
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010936940.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.46.5e-12288344155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++gr++A+++d  + ++  ++ k  + g ++ +e+Aa+a++ a++k++g
  XP_010936940.1 288 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 344
                     78*******************433.44555535555.779999**************98 PP
2AP247.44.8e-15387438155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  XP_010936940.1 387 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 438
                     78****************988532...5************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.4E-9288344IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-15288354IPR016177DNA-binding domain
CDDcd000186.10E-19288354No hitNo description
PROSITE profilePS5103217.332289352IPR001471AP2/ERF domain
SMARTSM003804.8E-23289358IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-12289353IPR001471AP2/ERF domain
PRINTSPR003673.6E-6290301IPR001471AP2/ERF domain
CDDcd000189.46E-25387448No hitNo description
PfamPF008478.4E-10387438IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-17387448IPR016177DNA-binding domain
PROSITE profilePS5103219.045388446IPR001471AP2/ERF domain
SMARTSM003809.6E-34388452IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-18388446IPR001471AP2/ERF domain
PRINTSPR003673.6E-6428448IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    Send to blast
MEMSGWLGFS LSSSKGDVSC CGDEVFGGGA DGGGGGGEVG FGHHPLAGMP LRSDGSICFM  60
GPPFRPPPPA PHGASDWRYG GAIVTAPTSS NQEGKGPKLE DFLGGYSENA SEENQGHQPI  120
SNFHDMYYQS SGGPGINVNM PPSFSPVERG AKEDTQISYH FLQPCHQSNH SFQEIPTLKP  180
QFLDPTPNPG PNSLYNGGID GSTSISGIKS WLRQNQYVPG KQLAEPSECN FQSLTLSMSP  240
VMQSGSSEMV PISSSVAAAD GTKYPNAKST TREPIPRKSI ETFGQRTSQY RGVTRHRWTG  300
RYEAHLWDNS CRKEGQTRKG RQGGYDKEEK AARAYDLAAL KYWGPTTHIN FPLSTYEKEL  360
EEMKHMTRQE FVAHLRRKSS GFSRGASVYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS  420
TQEEAAEAYD IAAIKFRGVN AVTNFDISKY DVKRICSSSH LITGDLAKRS PRDTPSPSEP  480
TEPDHRPTLA ITNSGSVDVD DLSHMMWNSY NKSDPPSNQP SNGGAVPLVS PSMSNPNAAL  540
DNKGESPRNS SSNEGACGDF PQAFYFPNGM KYEGGENVNG GSGGGGNMSW MVAAAARTPG  600
LPVAHQLPMF ALWNE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010936940.10.0AP2-like ethylene-responsive transcription factor AIL7 isoform X2
TrEMBLA0A2H3X2R70.0A0A2H3X2R7_PHODC; AP2-like ethylene-responsive transcription factor ANT
STRINGXP_008777425.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-120AP2 family protein