PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010937082.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 247aa MW: 27223.8 Da PI: 9.892

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010937082.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15	4.7e-05	36	85	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++ + +rE+ R ++N+ f+eL l +a ++ + Ka+iL A++ +++L XP_010937082.1 36 KKEHKAKREKLKRVHLNELFSELGHALEPA----GQNNGKASILGDATRLLQDL 85 5778899********************9....89999*******999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.27E-9	35	99	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	10.398	35	85	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.9E-7	35	104	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence Send to blast
MVTEPPSSMK NVENTIAEQP VGRLVPNKKN TGKVPKKEHK AKREKLKRVH LNELFSELGH 60 ALEPAGQNNG KASILGDATR LLQDLVARLG SLRKENAALV SESHYVAVEK NELKDENAVL 120 GAEIARLRNE LHERMHSDTV WHSGAEVAPP TMPQPTSAAL PVQQSPVGPL YVIPLHQDLH 180 PFSDTGNIAT LKPPSHVRRP HARYPTPSDS WSLELLSRHQ RAAHEALHNT STTIATFNSR 240 KEGTDKA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010937082.1	0.0	transcription factor BHLH062
Refseq	XP_010937084.1	0.0	transcription factor BHLH062
TrEMBL	A0A2H3Z3Y4	1e-151	A0A2H3Z3Y4_PHODC; transcription factor BHLH062-like
STRING	XP_008808049.1	1e-152	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2481	38	84

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.3	2e-31	bHLH family protein