PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010938166.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family CAMTA
Protein Properties Length: 1103aa    MW: 122612 Da    PI: 6.4458
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010938166.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1174.11.9e-54201353117
            CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     +e ++rwl+++ei++iL n+++++lt +++ rp  gsl+L++rk +ryfrkDG++w+kk+dgktvrE+hekLK g+v+vl+cyYah+e+n++fqr
  XP_010938166.1  20 QEaQTRWLRPSEICEILRNYRRFNLTPDPPYRPAGGSLFLFDRKALRYFRKDGHNWRKKRDGKTVREAHEKLKSGSVDVLHCYYAHGEDNENFQR 114
                     5559******************************************************************************************* PP

            CG-1  97 rcywlLeeelekivlvhylev 117
                     r+yw+L+ +le+ivlvhy++v
  XP_010938166.1 115 RSYWMLDGQLEHIVLVHYRDV 135
                     *******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.80315141IPR005559CG-1 DNA-binding domain
SMARTSM010762.7E-7718136IPR005559CG-1 DNA-binding domain
PfamPF038591.3E-4821135IPR005559CG-1 DNA-binding domain
CDDcd001020.00325528615No hitNo description
SuperFamilySSF812962.27E-15529614IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.202.8E-14709824IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.46E-14712822IPR020683Ankyrin repeat-containing domain
CDDcd002045.64E-13718820No hitNo description
PROSITE profilePS5029716.122718833IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.205762794IPR002110Ankyrin repeat
SMARTSM002480.0084762791IPR002110Ankyrin repeat
SMARTSM00248940801830IPR002110Ankyrin repeat
SMARTSM00015420883905IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.254884913IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525403.72E-7930989IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000153.7938960IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.517939968IPR000048IQ motif, EF-hand binding site
PfamPF006120.006941959IPR000048IQ motif, EF-hand binding site
SMARTSM000151.2E-4961983IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.688962990IPR000048IQ motif, EF-hand binding site
PfamPF006122.3E-5964983IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1103 aa     Download sequence    Send to blast
MADGRRYALN PQLDITQILQ EAQTRWLRPS EICEILRNYR RFNLTPDPPY RPAGGSLFLF  60
DRKALRYFRK DGHNWRKKRD GKTVREAHEK LKSGSVDVLH CYYAHGEDNE NFQRRSYWML  120
DGQLEHIVLV HYRDVNEGSR STIPHLPSID SGRVHGTQGT QANSALYSSH LNSSTSTTQA  180
SYDSSSSAAD WNGQAPSSEF EDADSGGEFG IGSLTDSVSW SGFQIASLAG NDLAEENTVG  240
CSGSSQLYAR GFVNTAGSSI DPSFVNQVPL QNFLLSEDQQ KIHGASQGAG SFGGVRFNDP  300
SSFAGWPDVL SIRGRNGNMQ EQNISFGHPN CPDNMQKGMV DSESNDNRIA TYVTDGGCNV  360
IGNALTQFFT EVGKRNDQVK EENTENVNSF DDEDLVKEST HMYQMPHDDL SHVAVEFKSN  420
SGSRWNISVP DQPLEYETEV SNTSNEPLKS DADNDEHGDL KKLDSFGRWM NKEIGKDCND  480
SLMASDSGNY WNALGTQNDG KEVSSLPRHM QLDIDSLGPS LSQEQLFSIV DFSPDWAYSG  540
VETKVLIAGT FIGSVEPTSI KWCCMFGELE VPAEVLTTNV LHCRAPTHAP GRVPFYITRS  600
DRLACSEIRE FEYRENLSGV SLVSKSEPED EIYLQVRFAK LLSLGVDRSK LFCSVENCSK  660
CSLKQKLFLM LNEEENGWKK IEKDSKVFQG FDKNPRDALI QKLLKGKLYE WLVCKAHEEG  720
RGPNILDEEG QGAIHLAGAL GYDWAMAPIV TAGVSPSFRD ARGRTGLHWA AYYGREETVV  780
TLIRLGAAPG AVEDPTSKFP HGQTAADLAS SRGHKGIAGY VAEADLTSHL SSLSLEGSVT  840
DSVSATLAAQ KTIETIQDHN VDSLDGNEGE QLSLRGSLAA VMNSAQAAAR IQAAFRLHSF  900
RQRQLRESKD EEAESLDDIM VLSSLNNKFH RISHFNEALH TAAVKIQQKY RGWKGRKEFL  960
KIRDRIVKIQ AHVRGHQVRK HYKKVVWSVS IVEKAILRWR RKGAGLRGFR AESASGDVEH  1020
GAGKTDEYDF LRLGRRQKAA GVEKALARVR SMARNPEARD QYMRLVACSR KSKLGDEENP  1080
SAQVHNSGEE KKIGEDLRAT MIH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010938166.10.0calmodulin-binding transcription activator 1 isoform X1
TrEMBLA0A2H3Y4H50.0A0A2H3Y4H5_PHODC; calmodulin-binding transcription activator 1-like
STRINGXP_008793313.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-165Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains