PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010938479.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 362aa    MW: 38922.9 Da    PI: 6.5673
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010938479.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-1763111355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  XP_010938479.1  63 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 111
                     56******.**********965...5***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575125No hitNo description
SMARTSM003801.7E-3062125IPR001471AP2/ERF domain
PROSITE profilePS5103220.52162119IPR001471AP2/ERF domain
CDDcd000181.71E-2762118No hitNo description
PRINTSPR003671.4E-76374IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-2763118IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-1963119IPR016177DNA-binding domain
PfamPF008474.4E-1165111IPR001471AP2/ERF domain
PRINTSPR003671.4E-785101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MSSSKTLDST AQISQGHNPP LVGSCQAKPS HSPSSSSSSS PPTTVTSPTE RRGRRKPTEP  60
GRFLGVRRRP WGRYAAEIRD PTTKERHWLG TFDTAQEAAL AYDRAALSMK GIQARTNFIY  120
TDTHISTFHS LLTPFHSQTF VPPPMPPPPT QPHHLIGTAS MQTTNQSMPS HSQMSRFTFQ  180
PSGGSSTTPA FGSSVETGID KDFLFSDDSR SGYLSSIIPE SCLRSSPRHS SPSQHNNISC  240
ELNAPILSPP NQVKSHGSSS ASSYSATNGA FFDAYGGVGA MSSEDFSCFT EMNSDFWVDE  300
PLWELSACEF PASNASSMGD LSTSLMQGPA CVSLPQASES YSPSTSSLSN VFDLGYSLIG  360
EH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1953118571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010938479.10.0ethylene-responsive transcription factor FZP
TrEMBLA0A2H3YBA61e-176A0A2H3YBA6_PHODC; ethylene-responsive transcription factor FZP-like
STRINGXP_008796243.11e-177(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP105252838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.11e-45ERF family protein