PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010939557.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 258aa    MW: 27977.9 Da    PI: 7.5064
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010939557.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.91.7e-17232258228
                     --SS-EEEEEEE--TT-SS-EEEEEE- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCt 28 
                     +Dgy+WrKYGqK vk+s+fprsYYrCt
  XP_010939557.1 232 EDGYRWRKYGQKAVKNSPFPRSYYRCT 258
                     8*************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.4E-18216258IPR003657WRKY domain
SuperFamilySSF1182904.32E-15223258IPR003657WRKY domain
PROSITE profilePS5081118.441226258IPR003657WRKY domain
SMARTSM007747.8E-6231258IPR003657WRKY domain
PfamPF031061.2E-12232258IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MRSSLQGEEE TREASIDRRH VGGSNAKPMP QLQKIRTKEK KRNRNPYLFI SPPILRLHLS  60
SPDAPESRLE SPPCRPIVGP TDGGQNRAPR ASDASGAPGW PFAGHGSGIS SLDELCGGER  120
EEASILSEFG WSIPMDSGTI GEDDGFSGFG LEGAPGPSEA VVAPPESRSD QPTAALPARS  180
GDAVSSSSSE EPPPEADEKP AETANKSTKK GQKRSRQPRF AFMTKSEIDH LEDGYRWRKY  240
GQKAVKNSPF PRSYYRCT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010911418.21e-121probable WRKY transcription factor 57
RefseqXP_019703379.11e-121probable WRKY transcription factor 57
TrEMBLA0A2H3X1Q93e-75A0A2H3X1Q9_PHODC; probable WRKY transcription factor 57 isoform X2
STRINGXP_008776993.18e-73(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21253796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.24e-28WRKY DNA-binding protein 57