PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010939773.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Nin-like

Protein Properties

Length: 253aa MW: 29494.5 Da PI: 4.9723

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010939773.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.7	2.4e-28	115	165	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek +++e++s+yF++pi++AAkeL++++T+LK++CR++GI+RWPhRk+ksl XP_010939773.1 115 EKVLTFEEVSHYFYMPITQAAKELNIGVTLLKKKCRELGIPRWPHRKLKSL 165 7889*********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.359	100	187	IPR003035	RWP-RK domain
Pfam	PF02042	2.8E-22	118	165	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0051302	Biological Process	regulation of cell division

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence Send to blast
MDNEQLGNWQ LVNDGVGFGE ENPDFSVLPI WTWQLDSFLE EEVLDVAPLV QSYPSEPFFP 60 TQDLFQEEPS SMFDGENGFW DDMKEGTENK KAASVCHGEK RGEKKMRNLR ECREEKVLTF 120 EEVSHYFYMP ITQAAKELNI GVTLLKKKCR ELGIPRWPHR KLKSLQTLIK NVKVMQEFGR 180 EDGDVGEAKI IRSALEILEQ ERKLVEKEPA TQLEEKTKRL RQACFKANYK KRRHMELEEP 240 QASAAFSFRC IED

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019710662.1	0.0	protein RKD1-like
TrEMBL	A0A3Q0IFA1	1e-155	A0A3Q0IFA1_PHODC; protein RKD1-like
STRING	XP_008802620.1	1e-156	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4590	33	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	8e-47	RWP-RK domain-containing protein