PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010939810.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 256aa    MW: 28055.2 Da    PI: 4.9352
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010939810.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like40.75.4e-131744128
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAt 28
                    kprl+Wt++LH+rFv+av+qLGG+++ +
  XP_010939810.1 17 KPRLKWTQQLHQRFVDAVSQLGGADNCV 44
                    79**********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.1E-111545IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-71742IPR006447Myb domain, plants
PfamPF143793.6E-1972113IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MPNQGENRGL VLSVDAKPRL KWTQQLHQRF VDAVSQLGGA DNCVAASNLT IDNEASQIDQ  60
EKTPARLNET MVQMQIEVQR KLQEQIEVQR HLQLRIEAQG KYLQSVLRKA QETLAGYSSN  120
SLGMEAAKAE LSELVSAVET ECLSSSFSQG SLIPKRAEHA DCSTDSCLTS SLERQEAKVG  180
KQHKLEHSSS LDNWSEGSDE INPNGMKAME TQVNDMLGME KGSCSSIHGE ANVEQPTSGK  240
QETSGFGVPR GLDLNR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939806.10.0myb family transcription factor PHL8 isoform X1
SwissprotQ9SQQ95e-42PHL9_ARATH; Myb-related protein 2
TrEMBLA0A2H3YR441e-155A0A2H3YR44_PHODC; myb-related protein 2-like isoform X4
STRINGXP_008802581.11e-156(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.22e-44G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Nakano Y,Naito Y,Nakano T,Ohtsuki N,Suzuki K
    NSR1/MYR2 is a negative regulator of ASN1 expression and its possible involvement in regulation of nitrogen reutilization in Arabidopsis.
    Plant Sci., 2017. 263: p. 219-225
    [PMID:28818378]