PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010940065.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 300aa MW: 32689.9 Da PI: 7.2467

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010940065.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.5	4e-40	52	111	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e+alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+s XP_010940065.1 52 HEQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNVPVGGGCRKNKRS 111 7899******************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-29	50	110	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.2E-33	54	110	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.357	56	110	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	58	94	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
MVAPPMRICM DSPDWLKGIV HEDSGMGSSS PSGELISCSR PPVMERRLRP QHEQALKCPR 60 CDSTHTKFCY YNNYSLSQPR YFCKTCRRYW TKGGSLRNVP VGGGCRKNKR SVAKKPSSEQ 120 PPHPVPSFQG GTDLHLSFSG VQFPHLDSLT DTPRNLNFME CKYNPMLGLS SPGELDLMDT 180 KFGAMLGSSR GHIFMGEAGV GLGETSHGFS TVGGFHGVSP LGFSAEGNHG AFVEACQRLA 240 LPFEAQEETN AAEVKPENRI LSLEWQDQCC ADAGRESGGY ADNLGLWAGM INVHGPSTTI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010940065.1	0.0	dof zinc finger protein DOF5.6
TrEMBL	A0A2H3YAK2	0.0	A0A2H3YAK2_PHODC; dof zinc finger protein DOF5.6-like
STRING	XP_008795919.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4704	32	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	1e-41	Dof family protein