PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010940398.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 298aa MW: 33102.3 Da PI: 8.2668

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010940398.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	112.8	1.5e-35	95	152	2	59
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 k+k +cprC+stntkfCyynnys sqPr+fC+aCrr+Wt GG+lrnvPvGggrr+++ XP_010940398.1 95 KQKPARCPRCESTNTKFCYYNNYSKSQPRHFCRACRRHWTDGGTLRNVPVGGGRRNKR 152 68899*************************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-22	93	152	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.1E-31	97	152	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.186	99	153	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	101	137	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence Send to blast
MLHSNPTCPL LLNAHSFLMS PHSTVQPHYK NLWQLSRRLV LLLPKHQRDS LQNLVVTMGF 60 SSKLVASDSL DRSQDGGLEI LKPKSEGKTQ DQQQKQKPAR CPRCESTNTK FCYYNNYSKS 120 QPRHFCRACR RHWTDGGTLR NVPVGGGRRN KRLNTEHNTS TSVDNNGVTI PQYQQQLQQM 180 PLPPFDGDNH SSSLPGILHQ VMLRPPPPPP LPLAYAMDGS GLCPVPPFQP EFGTAEADFS 240 TSSDNVINTL SSISSSSCSS PYNCTRLDPI PLPASYLSCW EDISDLVSAQ DSILSTYP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010940398.1	0.0	dof zinc finger protein DOF1.4
TrEMBL	A0A2H3X8U0	3e-97	A0A2H3X8U0_PHODC; dof zinc finger protein DOF3.4-like
STRING	XP_008780125.1	5e-98	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	1e-27	Dof family protein