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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | XP_010940795.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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| Family | G2-like | ||||||||
| Protein Properties | Length: 302aa MW: 33678.4 Da PI: 6.9421 | ||||||||
| Description | G2-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | G2-like | 35.3 | 2.6e-11 | 167 | 190 | 2 | 25 |
G2-like 2 prlrWtpeLHerFveaveqLGGse 25
pr+rWt++LH+rFv+ave LGG+e
XP_010940795.1 167 PRMRWTTTLHARFVHAVELLGGHE 190
9*********************97 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:1.10.10.60 | 2.0E-8 | 165 | 191 | IPR009057 | Homeodomain-like |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 302 aa Download sequence Send to blast |
MELFPAQPDL SLHISPPSSN PTPSWRRADE NMDLGFWQRT TDSTTTNHHS ITTLSMAKAE 60 KTAFELSLAH PSATDSNTMS NNLLQHPHHH PLVHEGYHQV LGLTRPIRGI PVYQHQPNSF 120 PLVPQLQQQH LCDSSTPTGF APFAPQGASR SRYLPSRFPL KRSMRAPRMR WTTTLHARFV 180 HAVELLGGHE SQSDGFENGS TGEISVDNLL DIPNTRREEP SAHGRPATHH ETNYGGLWGN 240 SSSRGDWSSG MPSDSTARSM HSFKEDMQSK SMEMLSDMNS PCISETTSLR EPSLEFTLGR 300 PQ |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_010940793.1 | 0.0 | probable transcription factor KAN2 isoform X1 | ||||
| TrEMBL | A0A2H3ZJF9 | 1e-165 | A0A2H3ZJF9_PHODC; probable transcription factor KAN2 | ||||
| STRING | XP_008802564.1 | 1e-120 | (Phoenix dactylifera) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G17695.1 | 1e-21 | G2-like family protein | ||||




