PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010941181.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 730aa    MW: 81211 Da    PI: 4.8071
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010941181.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.93.4e-5291421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp GfrFhPtdeelv++yLk+k++g+  +  evi+evd++k+ePwdLp k  +++++ ew+fF+++d+kya+g+r+nrat++gyWkatgkd+ + 
  XP_010941181.1   9 LPLGFRFHPTDEELVNHYLKRKITGRIKSDVEVIPEVDVCKCEPWDLPdKsIIRSDDLEWFFFAPKDRKYANGHRSNRATEAGYWKATGKDRVIR 103
                     699***********************988889***************96435566777************************************* PP

             NAM  94 sk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     sk    +++++g+kktLvf++grapkg +t+W+mheyr 
  XP_010941181.1 104 SKaaaaGHNVIGMKKTLVFHRGRAPKGIRTHWIMHEYRT 142
                     *988888888***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-594163IPR003441NAC domain
PROSITE profilePS5100557.2449163IPR003441NAC domain
PfamPF023653.1E-2710141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    Send to blast
MTAIALELLP LGFRFHPTDE ELVNHYLKRK ITGRIKSDVE VIPEVDVCKC EPWDLPDKSI  60
IRSDDLEWFF FAPKDRKYAN GHRSNRATEA GYWKATGKDR VIRSKAAAAG HNVIGMKKTL  120
VFHRGRAPKG IRTHWIMHEY RTTEPEFESG VQGGYVLYRL FKKSEEKSSN AKADEMDRSC  180
FSPTPAKLSP DDTQHEEDVM EEIATPLDQE SSDSVLQEGP HSLPDSVEQQ PAGIQIWLAD  240
ETDRSTTYSV KPDDSSCNIA SDNCDAKAGM HADPLQDVSA QYRDPHYEHI DSNGFPNIGS  300
PVLPYPDYFF GNMNHGSDTG YVNNADKDPL NEFLIAVLSN QDDYSSGASN VQKDSVAETL  360
PRHSIWDSAS CRDSRTSSEI DTEATLPQEL LGVEASKSFE GSSFLLNDPL RMDSLDGYPE  420
IEPQLSALYE NAYVLPYDGT GPDVCSVDSE SLQDLFNSME EPSNLKNVAN NGDRLEGAGI  480
SFRARRPQHP SNSDNKFAHQ GTAARRIRLQ GSTPKELFFS ADSESSCNKD DHEDKEAMKK  540
ALQDLFVGTE ESLTEKNTPS NEDGLEGTGI EIRARQTQHL PRLKKLSSKQ GTAVRRIRLQ  600
AHFEVGTFSS TVGELSSSKD DHEHKESMTE AGEHVDDNIA NLGEISKPAL PDKLEQLPVH  660
DNAPPASELC LESKPTLRLR TKRTDDNANT PEDPPRGRIP RSASVVYVIW LVLSVILVLM  720
CVGIWRCISS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-42916317165NO APICAL MERISTEM PROTEIN
1ut4_B2e-42916317165NO APICAL MERISTEM PROTEIN
1ut7_A2e-42916317165NO APICAL MERISTEM PROTEIN
1ut7_B2e-42916317165NO APICAL MERISTEM PROTEIN
3swm_A2e-42916320168NAC domain-containing protein 19
3swm_B2e-42916320168NAC domain-containing protein 19
3swm_C2e-42916320168NAC domain-containing protein 19
3swm_D2e-42916320168NAC domain-containing protein 19
3swp_A2e-42916320168NAC domain-containing protein 19
3swp_B2e-42916320168NAC domain-containing protein 19
3swp_C2e-42916320168NAC domain-containing protein 19
3swp_D2e-42916320168NAC domain-containing protein 19
4dul_A2e-42916317165NAC domain-containing protein 19
4dul_B2e-42916317165NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010941181.10.0protein NTM1-like 9
TrEMBLA0A2H4A0S10.0A0A2H4A0S1_PHODC; protein NTM1-like 9
STRINGXP_008788721.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.15e-72NAC 014