PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010941844.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 375aa    MW: 41283.5 Da    PI: 6.9106
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010941844.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.11.7e-32245300156
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     kpr++W+peLH+rFv a+++LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  XP_010941844.1 245 KPRRCWSPELHRRFVAALQHLGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 300
                     79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.348242302IPR017930Myb domain
SuperFamilySSF466895.85E-18242303IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-29242303IPR009057Homeodomain-like
TIGRFAMsTIGR015577.3E-27245300IPR006447Myb domain, plants
PfamPF002491.0E-6247298IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MGSVTPELGL DLKLCAMKSA SGFLKEAWAI EKGEGRMAKV EECVKSLEEE RRKIEAFKLI  60
QGLKEELEQC RMDGYAMSGN VLEEFMPIKS KFEEEDRVKF EDDTKDKMNW MSSAQLWSDN  120
YSDEKKDSTP TDEKRIAEKR VGEPDHETSS LESRGRSGGG AFVPFKGLSA LAANARKEEK  180
PAVGLPDLFL LSPGIKDSRS VPAVTDDHRG SDVISKATVR APAPSPLAAA GAHLSLHAQQ  240
QTQRKPRRCW SPELHRRFVA ALQHLGGAQV ATPKQIRELM KVDGLTNDEV KSHLQKYRLH  300
TRKVPNASAA VNHSVVVMGD LWVPQEHYST SQKSASQSGS PQSPLQLAGA GHTISITAGD  360
SCEEEDGKSE SYSWK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-14243304363ARR10-B
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010941843.10.0myb family transcription factor EFM
TrEMBLA0A2H3Y3240.0A0A2H3Y324_PHODC; myb family transcription factor EFM-like isoform X1
STRINGXP_008792690.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.14e-45G2-like family protein