PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010941952.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 178aa MW: 19860.6 Da PI: 10.6804

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010941952.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.1	3.8e-13	62	108	4	50
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r rr+++NRe+ArrsR+RK+ +e L+ + +L +eN+aL+++l XP_010941952.1 62 ERRRRRRISNRESARRSRKRKQHHLEDLRSQAGQLRSENQALADRLV 108 6899**************************************98875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.0E-12	59	123	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.8E-11	60	109	No hit	No description
Pfam	PF00170	3.8E-10	61	107	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.208	61	131	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.29E-10	63	112	No hit	No description
PROSITE pattern	PS00036	0	66	81	IPR004827	Basic-leucine zipper domain
CDD	cd14702	9.76E-16	69	114	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence Send to blast
MLSLDEIFSQ PLPALEGEFS FPPWHAPSSD PTPAPAPAPV PVPSSTACVE EPEQAALSPA 60 EERRRRRRIS NRESARRSRK RKQHHLEDLR SQAGQLRSEN QALADRLVDV VNRCLLFRRD 120 NDRLRSESTA LSRRLSELRR LLVVRQLRLL SSPLPPAPVA ACGGFASAYE QTLASLIA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	67	RRRRRR
2	65	81	RRRISNRESARRSRKRK
3	75	81	RRSRKRK
4	75	82	RRSRKRKQ
5	77	82	SRKRKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010941952.1	1e-121	basic leucine zipper 4-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP17765	5	10