PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010942101.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 316aa    MW: 35064.4 Da    PI: 9.3237
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010942101.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.18.5e-29166224158
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                     ++Dg++WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv++saed +v++ tYegeHnh
  XP_010942101.1 166 VKDGFQWRKYGQKVTRDNPSPRAYFRCSFApSCPVKKKVQKSAEDRSVLVATYEGEHNH 224
                     58***************************99**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081125.465161227IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.3E-28162227IPR003657WRKY domain
SuperFamilySSF1182902.22E-24164227IPR003657WRKY domain
SMARTSM007742.6E-32166226IPR003657WRKY domain
PfamPF031061.8E-23167224IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009617Biological Processresponse to bacterium
GO:0009620Biological Processresponse to fungus
GO:0009751Biological Processresponse to salicylic acid
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MKPAWIDRSS LSLDLSVGPL SFPDQAPIAK RAHHTNPMHV QGSSLKKDET EDLEAKLSRM  60
SEENKKLSEL LGAMCTNYST LRSQFFDFMS TSPKELGSIS PSRKRKRESL ETVGFNDKTY  120
ERTDSFSNRV ESLSSEDSCK RLGEDTKPKI TKVYVKTDPS DSSLVVKDGF QWRKYGQKVT  180
RDNPSPRAYF RCSFAPSCPV KKKVQKSAED RSVLVATYEG EHNHGHPSQN EVTHGAYHNG  240
SVPCSVSINS SGPTITLDLT KQGPRPPVGR ASRDIESPEF QRLLVEQMAS SLTKDPNFTA  300
ALVTAISGRI LQHPSA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-191652271374WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000250|UniProtKB:Q6QHD1}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by biotic elicitors (e.g. fungal chitin oligosaccharide) (By similarity). Induced by pathogen infection (e.g. M.grisea and X.oryzae pv. oryzae (Xoo)) (PubMed:16528562). Accumulates after treatment with benzothiadiazole (BTH) and salicylic acid (SA) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000269|PubMed:16528562}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010942101.10.0WRKY transcription factor WRKY76
SwissprotQ6IEK51e-87WRK76_ORYSI; WRKY transcription factor WRKY76
TrEMBLA0A2H3YJR20.0A0A2H3YJR2_PHODC; WRKY transcription factor WRKY76-like
STRINGXP_008799651.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP66603552
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.19e-81WRKY DNA-binding protein 40