PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010942291.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 243aa    MW: 25644.6 Da    PI: 10.2953
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010942291.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.4e-20109157355
             AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++++g
  XP_010942291.1 109 YRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRMRG 157
                     9*******.**********32....25*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.57E-21108167IPR016177DNA-binding domain
CDDcd000181.90E-14108167No hitNo description
SMARTSM003801.2E-33108171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.0E-30108166IPR001471AP2/ERF domain
PROSITE profilePS5103222.655108165IPR001471AP2/ERF domain
PfamPF008471.3E-14108157IPR001471AP2/ERF domain
PRINTSPR003679.1E-11109120IPR001471AP2/ERF domain
PRINTSPR003679.1E-11131147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
METTTTSLPF VHIKQEPPEP AEMPAPAGLV LPAAAPPRTA VTPSAAAVEE NPRPPPLDGI  60
AAVVGYHVLY GSRPDQAGPE RLPMAQKEGE FKGGAGTGGG EETSGGRNYR GVRKRPWGRW  120
SAEIRDRIGR CRHWLGTFDT AEEAARAYDA AARRMRGSKA KTNFATSVYI PKPLSSSSSS  180
SASSSKVGSG SKCGREEKRR GGESRRKCEK VTSFAQLLGS TRVAGGGAGE RLREGGDGSE  240
HVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-17106168366ATERF1
3gcc_A1e-17106168366ATERF1
5wx9_A4e-171091641571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010942291.21e-173ethylene-responsive transcription factor ERF084
SwissprotQ9M8M54e-25ERF84_ARATH; Ethylene-responsive transcription factor ERF084
TrEMBLA0A2H3XJU41e-102A0A2H3XJU4_PHODC; ethylene-responsive transcription factor ERF084
STRINGXP_008784884.11e-104(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2502245
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.16e-24ERF family protein