PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010942496.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

G2-like

Protein Properties

Length: 339aa MW: 36550.6 Da PI: 7.0023

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010942496.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.1	2e-33	48	102	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt++LHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_010942496.1 48 RQRLRWTHDLHERFVDAVTQLGGPDRATPKGVLRIMGVPGLTIYHVKSHLQKYRL 102 58****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	12.991	45	105	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	4.0E-32	47	103	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.51E-17	47	102	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.3E-25	49	103	IPR006447	Myb domain, plants
Pfam	PF00249	2.8E-8	50	101	IPR001005	SANT/Myb domain
Pfam	PF14379	2.6E-23	134	180	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence Send to blast
MYQPKAISNL GSAHNNPLAR DQPLELTGHS MGPGSGGTNP NNPNLASRQR LRWTHDLHER 60 FVDAVTQLGG PDRATPKGVL RIMGVPGLTI YHVKSHLQKY RLAKYIPESS SDGSKAEKKD 120 PEDLLSGLEN SSGIQITEAL KLQMEVQKRL HEQLEVQRQL QLRIEAQGKY LKKIIEEQQR 180 LSGVLAETPG VSIPAPISGD HCLDSDKTDP STPAPTSESP LQDKAASGDH GGTGGLFKSL 240 SRDDSFSSRR EPLTPDSSCR AGSPESPRRE RPIKRQRGAS GPGNGKTELV LAHHILESSS 300 GSEFHQPCPI FPAGGGHFDS SGTSTCDDDR LENGSGSDV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	4e-23	48	105	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	4e-23	48	105	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	4e-23	48	105	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	4e-23	48	105	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
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Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00252	DAP	Transfer from AT2G01060	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010942496.1	0.0	myb family transcription factor PHL7 isoform X2
Swissprot	Q9SJW0	1e-113	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2H3Y7Q9	0.0	A0A2H3Y7Q9_PHODC; myb family transcription factor PHL7-like isoform X1
STRING	XP_008794707.1	0.0	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	3e-93	G2-like family protein