PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943171.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 296aa    MW: 32015.6 Da    PI: 7.534
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943171.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_160.82.7e-19222284163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elk++rrkq NRe+ArrsR+RK+++ + L+++v+ L +eN aL+ ele+l k++++l+se+
  XP_010943171.1 222 ERELKKQRRKQLNRESARRSRLRKQQQYQDLARRVDMLNSENCALRRELEQLDKHCKELDSEN 284
                     89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.9E-91102IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1708.7E-16215281No hitNo description
PfamPF001706.0E-17222284IPR004827Basic-leucine zipper domain
SMARTSM003386.2E-14222286IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.553224287IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.34E-10225280No hitNo description
CDDcd147025.24E-17227277No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MGTGEQSIAS AKPSKAPTST APPADPPPPL LLAAHSDGST SAQATYGGGA AAASAEISVF  60
HPPPAVFFPY PWGSQYPMPP CGSPIAYAPM YPQGGIYSQP AMATGSVYIA AEAERRLAEK  120
KSKEESWNGG EGMKATSESA NEDASQSVNI ESEGSSSTGL QDYVVTQKKN IGKTLRDGGS  180
MQHTGSSQCD NTTAESCYSA ASLSPVAGQR GRLPKHHWML DERELKKQRR KQLNRESARR  240
SRLRKQQQYQ DLARRVDMLN SENCALRREL EQLDKHCKEL DSENASIAEE LSKIFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238244RRSRLRK
2238245RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943171.10.0G-box-binding factor 1 isoform X1
TrEMBLA0A2H3YA041e-145A0A2H3YA04_PHODC; G-box-binding factor 1 isoform X4
STRINGXP_008795622.11e-141(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.15e-34G-box binding factor 1