PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943172.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 295aa    MW: 31944.5 Da    PI: 7.534
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943172.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_160.82.7e-19221283163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elk++rrkq NRe+ArrsR+RK+++ + L+++v+ L +eN aL+ ele+l k++++l+se+
  XP_010943172.1 221 ERELKKQRRKQLNRESARRSRLRKQQQYQDLARRVDMLNSENCALRRELEQLDKHCKELDSEN 283
                     89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.9E-91102IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1708.7E-16214280No hitNo description
SMARTSM003386.2E-14221285IPR004827Basic-leucine zipper domain
PfamPF001705.9E-17221283IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.553223286IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.34E-10224279No hitNo description
CDDcd147025.06E-17226276No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MGTGEQSIAS AKPSKAPTST APPADPPPPL LLAAHSDGST SAQATYGGGA AAASAEISVF  60
HPPPAVFFPY PWGSQYPMPP CGSPIAYAPM YPQGGIYSQP AMATGSVYIA AEAERRLAEK  120
KSKEESWNGG EGMKATSESA NEDASQSVNI ESEGSSSTGL QDYVVTQKKN IGKTLRDGGS  180
MQHTGSSQCD NTTAESCYSA SLSPVAGQRG RLPKHHWMLD ERELKKQRRK QLNRESARRS  240
RLRKQQQYQD LARRVDMLNS ENCALRRELE QLDKHCKELD SENASIAEEL SKIFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1237243RRSRLRK
2237244RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943172.10.0G-box-binding factor 1 isoform X2
TrEMBLA0A2H3YA041e-142A0A2H3YA04_PHODC; G-box-binding factor 1 isoform X4
TrEMBLA0A2H3YA791e-142A0A2H3YA79_PHODC; G-box-binding factor 1 isoform X3
STRINGXP_008795622.11e-140(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.12e-34G-box binding factor 1