PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010943306.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 318aa MW: 32769.1 Da PI: 8.5886

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010943306.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.3	4e-39	40	101	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ++ +kcprCdstntkfCyynny+lsqPr+fCkaCrryWtkGG lrnvPvGgg+rk k+sss XP_010943306.1 40 QQPPVKCPRCDSTNTKFCYYNNYNLSQPRHFCKACRRYWTKGGVLRNVPVGGGCRKTKRSSS 101 56789*****************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-23	39	89	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	6.5E-33	43	98	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.516	44	98	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	46	82	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
MQDFQSIPGV SGRIFGGGGG GGGGGADVRR LRGYPAAAQQ QPPVKCPRCD STNTKFCYYN 60 NYNLSQPRHF CKACRRYWTK GGVLRNVPVG GGCRKTKRSS SSSSSKTSKS SSTTGDGDKD 120 SRRPSASRSS SDSSSLTAAT TEASASASAS ASASVSASFP DSTLFASSQT SHPNLSFDPP 180 PQTVALDTLG HQAPEIFSQV AAGSSFTGLM ATAATSPAVL GFNFSDPPPI RVGPQQSPPK 240 AAATLAEEIR MPGLMDQTAP VDLPPFHGRS GGGGGGLTGL DWPATVDPSL FDLTSAVDPG 300 AFWNQGHWGD ADPSLYLP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010943306.1	0.0	dof zinc finger protein 4
TrEMBL	A0A2H3XUC4	1e-151	A0A2H3XUC4_PHODC; dof zinc finger protein 4-like
STRING	XP_008788910.1	1e-152	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6496	30	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-28	DOF zinc finger protein 1