PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010943359.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 197aa MW: 22721.7 Da PI: 7.6689

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010943359.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.5	6e-13	83	142	4	63
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r rr+++NRe+ArrsR RK++ + eL v L a N++L +el++ +++ e+ XP_010943359.1 83 ERRKRRMISNRESARRSRMRKQKHLRELLSQVMHLRAANRQLLDELNRVMRDYDQILHEN 142 689**********************************************99999987776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.3E-15	80	144	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.2E-9	81	134	No hit	No description
PROSITE profile	PS50217	11.404	82	145	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.4E-11	82	142	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.63E-11	84	135	No hit	No description
CDD	cd14702	9.04E-17	85	136	No hit	No description
PROSITE pattern	PS00036	0	87	102	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence Send to blast
MQPGEVASIR YVAPPNPPSF QAHYNMAQNN NPSFPYCSIL GPYAVHQLQT IPLIHEISLL 60 GSCLGNNSTS DEAEENQLRL AEERRKRRMI SNRESARRSR MRKQKHLREL LSQVMHLRAA 120 NRQLLDELNR VMRDYDQILH ENAQLRDEES ELRKKLQDLL VDDTNGALQG LEEPCNTAHI 180 RAEPRDQQIT ASLKLLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	104	RRKRRMISNRESARRSRMRKQK
2	96	103	RRSRMRKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010943359.1	1e-143	basic leucine zipper 43
TrEMBL	A0A2H3YW69	1e-116	A0A2H3YW69_PHODC; basic leucine zipper 43-like
STRING	XP_008804405.1	1e-117	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1186	35	126

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	1e-33	basic leucine-zipper 42