PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943445.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 389aa    MW: 41148.6 Da    PI: 5.5793
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943445.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1711.8e-22276338163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN++L+ e+++++ke+++l s++
  XP_010943445.1 276 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRADSLKEENSSLRAEVNRIRKEYEQLLSQN 338
                     89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.3E-32198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.0E-38124248No hitNo description
Gene3DG3DSA:1.20.5.1709.5E-19270337No hitNo description
PfamPF001701.2E-20276338IPR004827Basic-leucine zipper domain
SMARTSM003381.0E-22276340IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.679278341IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.25E-11279336No hitNo description
CDDcd147021.99E-25281331No hitNo description
PROSITE patternPS000360283298IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MGNSEADTSA KTPKTSASQD GSPASSASPA ATVFPDWTSF QAYSPIPPHG FFHSSVASSP  60
QAHPYMWGAQ QFMPPYGTPP HPYVMYPPGG LYAHPSMPPG SHPFNPYAMP SPNGNAETGA  120
VPGGTEMDGK NNNEPGKTSG ASANGGFSQS GESGTESSSE GSDANSQNDS QPKTSGGQES  180
FDETSHRGNH TPGSQNGGTR MLSQAVLGQT IPIMPMPAAG ATSGVAGPTT NLNIGMDYWG  240
APSSSSLPPM HGKVPASAVA GAVVPGAPSE LWMQDERELK RQRRKQSNRE SARRSRLRKQ  300
AECEELAQRA DSLKEENSSL RAEVNRIRKE YEQLLSQNTS LKERLGEMQQ GTDNPRLDGD  360
EQNSGDDNHK RHSDSDAQAG EKDPVQSGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1292298RRSRLRK
2292299RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029116565.10.0bZIP transcription factor 16 isoform X2
SwissprotB6E1071e-134BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLA0A2H3Z9F60.0A0A2H3Z9F6_PHODC; bZIP transcription factor 16-like isoform X2
STRINGXP_008810162.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-111basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]