PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943572.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 442aa    MW: 49841.6 Da    PI: 7.6963
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943572.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.9e-11152192545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  XP_010943572.1 152 KTLRRLAQNREAARKSRLRKKAYVQQLENSRIKLTQLEQEL 192
                     7789************************9776666665554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.9E-8144194No hitNo description
SMARTSM003389.8E-9148233IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.312150194IPR004827Basic-leucine zipper domain
CDDcd147082.11E-21152204No hitNo description
PfamPF001702.9E-8152192IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.31E-7152194No hitNo description
PROSITE patternPS000360155170IPR004827Basic-leucine zipper domain
PfamPF141441.6E-32242316IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MANKGNSSQG QQQEQHISFG LIQPSSSTHG NFIRSREAGA YDLGELDQAL FMYLDGQDHS  60
SAQEQRQTLN IFPSQPMHVE PSTKGEISLV SPTSSGSKKS PEQTMELGNP RSNPPALPEP  120
GKDLKAVVKN EGNNRKGTSS SEQERPKTPD PKTLRRLAQN REAARKSRLR KKAYVQQLEN  180
SRIKLTQLEQ ELQRARAQGF FFGGALLGEQ GGFPPSISAL SSDAAMFDME YARWLEEHHR  240
RMCELRAAVQ EHLPENELRM FVENCLAHYD EMINLKSLVI KSDVFHLISG MWKTPAERCF  300
LWMGGFRPSE LIKMLLSHIE PLTEQQILGV CGLQQSTQET EEALSQGLEA LHQSLLDTVT  360
SDALSCPSNM ANYMGQMAIA MNKLTTLEGF VRQADNLRHQ TLHRLHHILT TRQMARCLLA  420
IAEYFHRLRA LSSLWLARPR QE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943572.10.0bZIP transcription factor TGA10 isoform X1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2H3YM290.0A0A2H3YM29_PHODC; bZIP transcription factor TGA10-like
STRINGXP_008800656.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-161bZIP family protein