PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943623.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 472aa    MW: 52293.4 Da    PI: 9.663
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943623.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-20280328355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+ kl+g
  XP_010943623.1 280 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAMAYDMAAYKLRG 328
                     8******9.**********955...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.64E-23278338No hitNo description
SMARTSM003805.6E-38279342IPR001471AP2/ERF domain
PROSITE profilePS5103222.998279336IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-23279337IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-31279337IPR001471AP2/ERF domain
PRINTSPR003678.3E-11280291IPR001471AP2/ERF domain
PfamPF008473.6E-14280328IPR001471AP2/ERF domain
PRINTSPR003678.3E-11302318IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MKDAKLAALA LAAHISLSKF MSSQIEMEAE EIEKIPYASD KMGSLMYTMV YRRLDLTHIV  60
SQVNRFMVDP GKEHWRTLKG IFRCALHCFY SEDTTGSSEK RFGGGVLQHI GSDKRMDDRY  120
PKAHGSAWSS HHHHFPSSLN TSILNFLDPK SEHLMESLME LNGTPTISQV VPPPSSSSSS  180
RNSSSSSTTM ASKPPSSFTF FLQKEPMFEP SPLLTSSNTP LSSADLHINL QMYQKLQETG  240
GMAEGLQLHH LHRIGSINSL SSIGLETSKG RQQRQQAKLF RGVRQRHWGK WVAEIRLPRN  300
RTRVWLGTFD TAEEAAMAYD MAAYKLRGDL AHLNFPHLKH QLRNAASGSS HPHAATASLL  360
EAKLKASSNF SAPSTSNQPK RLPEKEFLRM GAGECMGQVK KQKKTGTDEE AASTSIARTR  420
SKKELPSDLE GKKAAQQELI LGGDADGVLL SRMPSLDMDM IWDSLPISAS DS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-19278336160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-19276336263ATERF1
3gcc_A3e-19276336263ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008777305.10.0ethylene-responsive transcription factor ERF062-like
TrEMBLA0A2H3X2G60.0A0A2H3X2G6_PHODC; ethylene-responsive transcription factor ERF062-like
STRINGXP_008777305.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2292046
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.12e-34ERF family protein