PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011069555.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 242aa    MW: 26264.9 Da    PI: 6.3458
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011069555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.8e-183483255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  XP_011069555.1 34 KYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 83
                    8*****998.**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.5E-113483IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.0E-303492IPR001471AP2/ERF domain
SMARTSM003802.6E-353497IPR001471AP2/ERF domain
PROSITE profilePS5103221.6943491IPR001471AP2/ERF domain
CDDcd000184.11E-203491No hitNo description
SuperFamilySSF541717.19E-203492IPR016177DNA-binding domain
PRINTSPR003671.7E-83546IPR001471AP2/ERF domain
PRINTSPR003671.7E-85773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MVKSGNKKIN IPCSSTTPAA AATANSSKSQ CKNKYKGVRM RSWGSWVSEI RAPNQKTRIW  60
LGSYSTPEAA ARAYDAALLC LKGSSANLNF PLNSTHNNPN PDNAIMSPKS IQRVAAAAAA  120
AANADQDSAH FINPHSPLLS ATSSSSNTWS STSSPSLSSS SPNSDSNIHN IDDDRISLAA  180
PAADDYKVHD NQLDEPSVFA MSSWYNFDSP KYTEMLNGVF FDPTMMEDYS YEDTDIRLWS  240
FC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1333911372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011069555.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0432141e-51KJ043214.1 Sesamum indicum clone TilSSR_14415 microsatellite Sesame_14415 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011069555.11e-177ethylene-responsive transcription factor ERF014
TrEMBLA0A2G9GNX22e-62A0A2G9GNX2_9LAMI; Uncharacterized protein
STRINGMigut.N03295.1.p5e-53(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61772435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-32ERF family protein