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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_011069635.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
| Family |
GRAS |
| Protein Properties |
Length: 490aa MW: 54679.6 Da PI: 5.8128 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011069635.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 335.9 | 7.3e-103 | 104 | 484 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykal....ppsetseknsseelaalklfsevs 88
l++lL+++Aea++ +++ la+ +L rl+el+sp++ ++m+Rlaayft AL+ l ++ + + + ++e++++e+laa++l++++s
XP_011069635.1 104 LIHLLMAAAEALTGPNKSreLARVILVRLKELVSPNDgTNMERLAAYFTDALQGLLDGTACGGKNVPgggcGHQYKEEHHQTEVLAAFQLLQDMS 198
689**********85554449***********8887669*****************9944333332222113344444559************** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179
P++kf+h+taNqaIleav +++rvHi+D+di++G+QW++L+qaL sR++gpp +lRiT++++ sg s +++etg+rL+ fA+++g pf+f+
XP_011069635.1 199 PYVKFGHFTANQAILEAVTHDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPtpHLRITALSRGGSGrrSFGTIQETGRRLTAFAASIGQPFSFH 293
************************************************776556*********888898999*********************** PP
GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdslea 273
++ e++++++L++ +gEal+ n++l+l ++ + ++ + ++L+ k+l+P+++++ve+e+ ++e F+ rf+++l++ysa++dslea
XP_011069635.1 294 QCRLDSDETFRPSSLKLVRGEALIFNCMLHLPHFSYR---APESIASFLSGSKTLNPRLITLVEEEMRSpSDEGFVGRFMDSLHHYSAVYDSLEA 385
*9999**************************999844...4444569**********************9************************* PP
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpL 367
++p + ++r+ vEr++lg++i +a ++ +e+ +W ++l+++GF+pv+ s + +qaklll ++ dgyrvee s+ lvlgWk+r+L
XP_011069635.1 386 GFPMQGRARALVERVFLGPRIAGSLARIYRA--CGEEEWCSWGQWLSAVGFRPVNTSFANHCQAKLLLGLYN-DGYRVEELsSNKLVLGWKSRRL 477
**************************99988..777889********************************9.******8648999********* PP
GRAS 368 vsvSaWr 374
+s+S W+
XP_011069635.1 478 LSASIWT 484
******6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 490 aa
Download sequence Send
to blast |
MAMVMDLDHF PNFSYATAST DDGCNWNYWS PVVDWEELSA GQEDFHHLID SMVVQDVVLN 60
QSPSPSIYQD YNNSSPDYNN SSPEYNMMTD DETNGSDDCK GLRLIHLLMA AAEALTGPNK 120
SRELARVILV RLKELVSPND GTNMERLAAY FTDALQGLLD GTACGGKNVP GGGCGHQYKE 180
EHHQTEVLAA FQLLQDMSPY VKFGHFTANQ AILEAVTHDR RVHIVDYDIM EGIQWASLMQ 240
ALVSRKDGPP TPHLRITALS RGGSGRRSFG TIQETGRRLT AFAASIGQPF SFHQCRLDSD 300
ETFRPSSLKL VRGEALIFNC MLHLPHFSYR APESIASFLS GSKTLNPRLI TLVEEEMRSP 360
SDEGFVGRFM DSLHHYSAVY DSLEAGFPMQ GRARALVERV FLGPRIAGSL ARIYRACGEE 420
EWCSWGQWLS AVGFRPVNTS FANHCQAKLL LGLYNDGYRV EELSSNKLVL GWKSRRLLSA 480
SIWTSKDSDL
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 164 | 172 | GGKNVPGGG |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |
