PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070058.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 183aa    MW: 20868.4 Da    PI: 8.5634
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.11.1e-25113173259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgy+WrKYGqK++ g+++prsY+rC ++   gC+++k+v+rs+++p + ++tY+g+H ++
  XP_011070058.1 113 DDGYCWRKYGQKDILGAKYPRSYFRCLYRytqGCMATKQVQRSDDEPLIYDTTYTGKHSCS 173
                     8*************************998888**************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-25104173IPR003657WRKY domain
PROSITE profilePS5081123.674107175IPR003657WRKY domain
SuperFamilySSF1182904.45E-24110173IPR003657WRKY domain
SMARTSM007741.6E-36112174IPR003657WRKY domain
PfamPF031061.0E-24113172IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MDKEPPQAFE SIQAYFTLKH EVSKGREQVK QLKAASSGDQ EKILERMLAS YEEVWSILNE  60
MAAEGKDLPV IPPSSDSPAS GKSVLRHKRG SYKRKSSDSI SVRRHRAPEE LDDDGYCWRK  120
YGQKDILGAK YPRSYFRCLY RYTQGCMATK QVQRSDDEPL IYDTTYTGKH SCSSSAPIDK  180
ETL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-20113172968OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070058.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020547504.11e-134probable WRKY transcription factor 30 isoform X1
TrEMBLA0A2G9H4462e-48A0A2G9H446_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18432467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.19e-32WRKY DNA-binding protein 30