PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070193.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family MYB_related
Protein Properties Length: 131aa    MW: 15044.5 Da    PI: 5.2407
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-081255445
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     W+ +Ed++l +a  +++ g    W++Ia+ ++  +++ ++++++ 
   XP_011070193.1 12 WSRQEDKILEQALVEFPEGidhWWRRIAEFLP-SKSPDEVRLHYE 55
                     ********************************.**********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007176.3E-7860IPR001005SANT/Myb domain
SuperFamilySSF466893.04E-111070IPR009057Homeodomain-like
PfamPF002495.1E-81156IPR001005SANT/Myb domain
CDDcd001674.70E-81258No hitNo description
PROSITE profilePS500907.5961258IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.7E-61259IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
QQQSVDSAAA VWSRQEDKIL EQALVEFPEG IDHWWRRIAE FLPSKSPDEV RLHYEALLHD  60
IVEIDSGRVE LPGYSDESAP LGWDEARPRV PGQISLSGGN HSRHSEVERK KGRPWTEDEH  120
RFDGLLHLHH G
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070193.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070193.12e-90protein RADIALIS-like 4, partial
TrEMBLA0A2G9IA537e-51A0A2G9IA53_9LAMI; Uncharacterized protein
STRINGMigut.F01593.1.p4e-40(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.12e-27MYB family protein